Publications
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Comparing energetic and dynamic description of food web linkages. Oikos, 120, pp.194-199. Available at: http://onlinelibrary.wiley.com.ezproxy.library.wisc.edu/doi/10.1111/j.1600-0706.2010.18424.x/pdf.
, 2011. A comparative study of within-basin and regional peatland development: implications for peatland carbon dynamics. Quaternary Science Reviews, 61, pp.85-95. Available at: http://www.sciencedirect.com/science/article/pii/S0277379112004398.
, 2013. Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage. ISME Journal, 8, pp.2503-2516. Available at: http://www.nature.com/ismej/journal/v8/n12/abs/ismej2014135a.html.
, 2014. Comparative responses of aquatic ecosystems to toxic chemical stress. In Comparative Analyses of Ecosystems. Comparative Analyses of Ecosystems. New York: Springer, pp. 169-195. Available at: http://link.springer.com/chapter/10.1007/978-1-4612-3122-6_9.
, 1991. Comparative feeding ecology of Tropocyclops prasinus mexicanus (Copepoda, Cyclopoida). Journal of Plankton Research, 14, pp.1369-82. Available at: https://academic.oup.com/plankt/article/14/10/1369/1651433/Comparative-feeding-ecology-of-Tropocyclops.
, 1992. Communities contain closely related species during ecosystem disturbance. Ecology Letters, 13, pp.162-174. Available at: http://onlinelibrary.wiley.com/doi/10.1111/j.1461-0248.2009.01411.x/full.
, 2010. Comment on Bachmann et al.: A non-representative sample cannot describe the extent of cultural eutrophication of natural lakes in the United States. Limnology and Oceanography, 59, pp.2226–2230. Available at: http://onlinelibrary.wiley.com.ezproxy.library.wisc.edu/doi/10.4319/lo.2014.59.6.2226/pdf.
, 2014. Collapse, learning, and renewal. In Panarchy: understanding transformations in human and natural systems. Panarchy: understanding transformations in human and natural systems. Washington, DC: Island Press, pp. 173-93.
, 2002. 
Cohort structure, biomass, and production of a merovoltine Chironomus population in a Wisconsin bog lake. Journal of the North American Benthological Society, 9, pp.180-92. Available at: http://www.journals.uchicago.edu/doi/abs/10.2307/1467450.
, 1990. Cohort structure and voltinism in two profundal Chironomus populations. Verh. Internat. Verein. Limnol., 24, pp.438-44.
, 1990. 
Coherent ecological dynamics induced by large-scale disturbance. Nature, 454, pp.331-335. Available at: http://www.nature.com/nature/journal/v454/n7202/full/nature06935.html.
, 2008. Coherent dynamics among lakes. In Long-Term Dynamics of Lakes in the Landscape: Long-Term Ecological Research on North Temperate Lakes. Long-Term Dynamics of Lakes in the Landscape: Long-Term Ecological Research on North Temperate Lakes. Oxford University Press, pp. 89-106. Available at: https://books.google.com/books?hl=en&lr=&id=CkFuLsV5tuMC&oi=fnd&pg=PA89&dq=%22Coherent%2Bdynamics%2Bamong%2Blakes%22+Magnuson&ots=T8-PGu-pFY&sig=NOky1hcXky_n-eBZAjlx_FSB2ik#v=onepage&q=%22Coherent%2Bdynamics%2Bamong%2Blakes%22%20Magnuson&f=false.
, 2006. Coherence of long-term lake ice records. Verh. Internat. Verein. Limnol., 27, pp.2789-92. Available at: https://www.glerl.noaa.gov//pubs/fulltext/2000/20000017.pdf.
, 2000. Coherence of lake ice thaw dates on the Laurentian Shield as influenced by location and size as an indicator of regional climate change. Symposium on Freshwater Ecosystems and Climate Change in North America.
, 1994. Coherence between lake ice cover, local climate and teleconnections (Lake Mendota, Wisconsin). Journal of Hydrology, 374, pp.282-293. Available at: http://www.sciencedirect.com/science/article/pii/S0022169409003515.
, 2009. Coarse woody habitat, lakeshore residential development, and largemouth bass nesting behavior. North American Journal of Fish Management, 31, pp.666–670. Available at: http://www.tandfonline.com/doi/abs/10.1080/02755947.2011.608990.
, 2011. Coarse woody debris in lakes and streams. Encyclopedia of Inland Waters, 1, pp.60-69. Available at: https://www.researchgate.net/publication/288227515_Coarse_Woody_Debris_in_Lakes_and_Streams.
, 2009. 
CO2 time series patterns in contrasting headwater streams of North America. Aquatic Sciences, 79, pp.473–486. Available at: https://doi.org/10.1007/s00027-016-0511-2.
, 2017. CO2 and CH4 emissions from streams in a lake-rich landscape: Patterns, controls and regional significance. Global Biogeochemical Cycles, 28, pp.197-210. Available at: http://onlinelibrary.wiley.com/doi/10.1002/2013GB004661/full.
, 2014. Closing the data life cycle: using information management in macrosystems ecology research. Frontiers in Ecology and the Environment, 12, pp.24-30. Available at: http://onlinelibrary.wiley.com/doi/10.1890/120375/full.
, 2014. Climate-induced warming of lakes can be either amplified or suppressed by trends in water clarity. Limnology and Oceanography Letters. Available at: http://onlinelibrary.wiley.com/doi/10.1002/lol2.10027/full.
, 2016. Climate perturbations and lakes: estimating sensitivities of water and carbon budgets. Journal of Geophysical Research, 114, pp.1-11. Available at: http://onlinelibrary.wiley.com/doi/10.1029/2008JG000891/full.
, 2009. Climate driven variability and change. In Long-Term Dynamics of Lakes in the Landscape: Long-Term Ecological Research on North Temperate Lakes. Long-Term Dynamics of Lakes in the Landscape: Long-Term Ecological Research on North Temperate Lakes. Oxford University Press, pp. 123-150. Available at: https://books.google.com/books?hl=en&lr=&id=CkFuLsV5tuMC&oi=fnd&pg=PA123&dq=%22Climate%2Bdriven%2Bvariability%2Band%2Bchange%22+Magnuson&ots=T8-PGu-mE_&sig=pAtdrhIGdYKl87Z1X_m5jt4IirE#v=onepage&q=%22Climate%2Bdriven%2Bvariability%2Band%2Bchange%22%20Magnu.
, 2006.